Monsieur Cédric ABAT / PhD
Epidemiologiste en santé publique
Contact details
Jobs
Additional information : - sports : karaté (deux ans, ceinture orange) et jujitsu (deux ans, ceinture verte), football et rugby. - voyages.
Research : NON
Skills
- Pack Office (version 2007) et Open Office.org 3 - R, phpMyAdmin, Exao, Mapple (modélisation et statistiques), Arcgis (cartographie). - 2009: C2I – Université des sciences de Perpignan Via Domitia (UPVD).
Techniques
- Analyse de données biologiques (biostatistique). - Gestion de bases de données. - Création de systèmes de surveillance sur Excel par l'utilisation du langage visual basic.
PhD
Title : Biologie-Santé - Spécialité Maladies Infectieuses
First registration date : 29 October 2012 / 3A
Doctoral school : Sciences de la Vie et de la Santé
Thesis defense date : 12 October 2015
Subject : DÉVELOPPEMENT DE NOUVEAUX OUTILS INFORMATIQUES DE SURVEILLANCE EN TEMPS RÉEL DES PHÉNOMÈNES ANORMAUX BASÉS SUR LES DONNÉES DE MICROBIOLOGIE CLINIQUE DU LABORATOIRE DE LA TIMONE
Thesis supervisor : ROLAIN Jean-Marc
Thesis co-supervisor : COLSON Philippe
Research unit : URMITE - Unité de Recherche sur les Maladies Infectieuses et Tropicales
Team : Unité des Rickettsies et des pathogènes émergents
Master's degree
Title : Ecologie-Biodiversité
September 2012 - Université Montpellier II
Mention : bien
Publications
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Identification of Rare Pathogenic Bacteria in a Clinical Microbiology Laboratory: Impact of Matrix-Assisted Laser Desorption Ionization–Time of Flight Mass Spectrometry
J Clin Microbiol, 2013
Piseth Seng, Cédric Abat, Jean Marc Rolain, Philippe Colson, Jean-Christophe Lagier, Frédérique Gouriet, Pierre Edouard Fournier, Michel Drancourt, Bernard La Scola and Didier Raoult
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3697718/
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Increasing Trend of Invasive Group B Streptococcal Infections, Marseille, France
Clinical Infectious Disease, 2013
Cédric Abat, Hervé Chaudet, Didier Raoult, and Philippe Colson
http://cid.oxfordjournals.org/content/early/2013/12/13/cid.cit777
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Salmonella and Campylobacter Contamination of Ready-to-Eat Street-Vended Pork Meat Dishes in Antananarivo, Madagascar: A Risk for the Consumers?
Foodborne Pathog Dis, 2015
Cardinale E, Abat C, Bénédicte C, Vincent P, Michel R, Muriel M
http://www.ncbi.nlm.nih.gov/pubmed/25764444
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Increasing burden of urinary tract infections due to intrinsic colistin-resistant bacteria in hospitals in Marseille, France.
Int J Antimicrob Agents, 2015
Abat C, Desboves G, Olaitan AO, Chaudet H, Roattino N, Fournier PE, Colson P, Raoult D, Rolain JM
http://www.ncbi.nlm.nih.gov/pubmed/25497970
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Correlation between sputum and bronchoalveolar lavage fluid cultures
J Clin Microbiol, 2015
Dubourg G, Abat C, Rolain JM, Raoult D
http://www.ncbi.nlm.nih.gov/pubmed/25540405
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Worldwide decrease in methicillin-resistant Staphylococcus aureus: do we understand something?
Clin Microbiol Infect, 2015
Rolain JM, Abat C, Brouqui P, Raoult D
http://www.ncbi.nlm.nih.gov/pubmed/25941171
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Emergence of clusters of CRF02_AG and B human immunodeficiency viral strains among men having sex with men exhibiting HIV primary infection in southeastern France
J Med Virol., 2015
Tamalet C, Ravaux I, Moreau J, Brégigeon S, Tourres C, Richet H, Abat C, Colson P
http://www.ncbi.nlm.nih.gov/pubmed/25873310
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A real-time microbiology laboratory surveillance system implemented for the detection of abnormal events and emerging infections, Marseille, France
Emerg Infect Dis, 2015
Cédric Abat, Hervé Chaudet, Philippe Colson, Jean-Marc Rolain, Didier Raoult
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E.cecorum human infection, France
NMNI, 2015
Edouard Delaunay; Cédric Abat; Jean-Marc Rolain
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Dramatic decrease of Streptococcus pneumoniae in Marseille, 2009-2014
EJCMID, 2015
Cédric ABAT, Didier RAOULT, Jean-Marc ROLAIN
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Low level of resistance in Enterococci strains isolated in four French hospitals, Marseille, France
MDR, 2015
Cédric ABAT, Didier RAOULT, Jean-Marc ROLAIN
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Molecular epidemiology and distribution of serotypes, genotypes, and antibiotic resistance genes of Streptococcus agalactiae clinical isolates from Guelma, Algeria, and Marseille, France
EJCMID, 2015
Amira Bergal, Lotfi Loucif, Djamel Eddine Benouareth, Ahmed Aimen Bentorki, Cédric Abat and Jean-Marc Rolain
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EPIMIC: a simple homemade computer program for real-time EPIdemiological surveillance and alert based on MICrobiological data
PlosOne, 2015
P. COLSON, JM ROLAIN, C ABAT, R. CHARREL, PE FOURNIER, D. RAOULT
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Citrobacter amalonaticus urinary-tract human infections, Marseille, France
Journal of Clinical Microbiology, 2015
V. GARCIA, C. ABAT and JM. ROLAIN
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Traditional and syndromic surveillance of infectious diseases and pathogens
Eurosurveillance, 2015
C. Abat, H. Chaudet, JM. Rolain, P. Colson, D. Raoult
Languages
Anglais : C2 - Courant
Espagnol : B1 - Intermédiaire
Malgache : A2 - Élémentaire